Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCDC90B | MRPL53 | ENSCCEP00000001227 | ENSCCEP00000009664 | Coiled-coil domain-containing protein 90B, mitochondrial isoform X1. | 39S ribosomal protein L53, mitochondrial. | 0.529 |
CCDC90B | NIPAL2 | ENSCCEP00000001227 | ENSCCEP00000008330 | Coiled-coil domain-containing protein 90B, mitochondrial isoform X1. | NIPA-like protein 2 isoform X1. | 0.473 |
MATN2 | NIPAL2 | ENSCCEP00000008342 | ENSCCEP00000008330 | LOW QUALITY PROTEIN: matrilin-2. | NIPA-like protein 2 isoform X1. | 0.499 |
MRPL53 | CCDC90B | ENSCCEP00000009664 | ENSCCEP00000001227 | 39S ribosomal protein L53, mitochondrial. | Coiled-coil domain-containing protein 90B, mitochondrial isoform X1. | 0.529 |
MRPL53 | NIPAL2 | ENSCCEP00000009664 | ENSCCEP00000008330 | 39S ribosomal protein L53, mitochondrial. | NIPA-like protein 2 isoform X1. | 0.529 |
NFYC | NIPAL2 | ENSCCEP00000020651 | ENSCCEP00000008330 | Nuclear transcription factor Y subunit gamma isoform X1. | NIPA-like protein 2 isoform X1. | 0.443 |
NIPAL2 | CCDC90B | ENSCCEP00000008330 | ENSCCEP00000001227 | NIPA-like protein 2 isoform X1. | Coiled-coil domain-containing protein 90B, mitochondrial isoform X1. | 0.473 |
NIPAL2 | MATN2 | ENSCCEP00000008330 | ENSCCEP00000008342 | NIPA-like protein 2 isoform X1. | LOW QUALITY PROTEIN: matrilin-2. | 0.499 |
NIPAL2 | MRPL53 | ENSCCEP00000008330 | ENSCCEP00000009664 | NIPA-like protein 2 isoform X1. | 39S ribosomal protein L53, mitochondrial. | 0.529 |
NIPAL2 | NFYC | ENSCCEP00000008330 | ENSCCEP00000020651 | NIPA-like protein 2 isoform X1. | Nuclear transcription factor Y subunit gamma isoform X1. | 0.443 |
NIPAL2 | NME6 | ENSCCEP00000008330 | ENSCCEP00000006250 | NIPA-like protein 2 isoform X1. | Nucleoside diphosphate kinase 6. | 0.482 |
NIPAL2 | STXBP4 | ENSCCEP00000008330 | ENSCCEP00000018371 | NIPA-like protein 2 isoform X1. | Syntaxin-binding protein 4 isoform X1. | 0.495 |
NIPAL2 | TM2D1 | ENSCCEP00000008330 | ENSCCEP00000008056 | NIPA-like protein 2 isoform X1. | TM2 domain-containing protein 1. | 0.420 |
NIPAL2 | TXNDC16 | ENSCCEP00000008330 | ENSCCEP00000001246 | NIPA-like protein 2 isoform X1. | Thioredoxin domain-containing protein 16 isoform X1. | 0.528 |
NIPAL2 | USP15 | ENSCCEP00000008330 | ENSCCEP00000009602 | NIPA-like protein 2 isoform X1. | Ubiquitin carboxyl-terminal hydrolase 15 isoform X1. | 0.461 |
NME6 | NIPAL2 | ENSCCEP00000006250 | ENSCCEP00000008330 | Nucleoside diphosphate kinase 6. | NIPA-like protein 2 isoform X1. | 0.482 |
STXBP4 | NIPAL2 | ENSCCEP00000018371 | ENSCCEP00000008330 | Syntaxin-binding protein 4 isoform X1. | NIPA-like protein 2 isoform X1. | 0.495 |
STXBP4 | TXNDC16 | ENSCCEP00000018371 | ENSCCEP00000001246 | Syntaxin-binding protein 4 isoform X1. | Thioredoxin domain-containing protein 16 isoform X1. | 0.495 |
TM2D1 | NIPAL2 | ENSCCEP00000008056 | ENSCCEP00000008330 | TM2 domain-containing protein 1. | NIPA-like protein 2 isoform X1. | 0.420 |
TXNDC16 | NIPAL2 | ENSCCEP00000001246 | ENSCCEP00000008330 | Thioredoxin domain-containing protein 16 isoform X1. | NIPA-like protein 2 isoform X1. | 0.528 |
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