STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LY96LOW QUALITY PROTEIN: lymphocyte antigen 96. (174 aa)    
Predicted Functional Partners:
TLR4
Toll-like receptor 4.
   
 0.999
MYD88
Myeloid differentiation primary response protein MyD88.
   
 
 0.969
CD14
Monocyte differentiation antigen CD14.
    
 0.884
LOC111943942
TLR4 interactor with leucine rich repeats-like.
    
  0.866
TLR5
Toll-like receptor 5.
   
 0.833
LY86
Lymphocyte antigen 86.
   
 0.772
TLR3
Toll-like receptor 3 isoform X1.
   
 0.768
TLR7
Toll-like receptor 7 isoform X1.
   
 0.751
TRAF6
TNF receptor-associated factor 6.
   
 
 0.738
LOC111926389
Toll-like receptor 2.
   
 0.733
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.