Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLI1 | GLI2 | ENSCCEP00000025448 | ENSCCEP00000004669 | Zinc finger protein GLI1. | Zinc finger protein GLI2. | 0.982 |
GLI1 | GLI3 | ENSCCEP00000025448 | ENSCCEP00000018213 | Zinc finger protein GLI1. | Transcriptional activator GLI3. | 0.983 |
GLI1 | KIF3A | ENSCCEP00000025448 | ENSCCEP00000014047 | Zinc finger protein GLI1. | Kinesin family member 3A. | 0.575 |
GLI1 | KIF7 | ENSCCEP00000025448 | ENSCCEP00000011892 | Zinc finger protein GLI1. | Kinesin-like protein KIF7. | 0.970 |
GLI1 | SMO | ENSCCEP00000025448 | ENSCCEP00000006205 | Zinc finger protein GLI1. | Smoothened homolog. | 0.831 |
GLI1 | STK36 | ENSCCEP00000025448 | ENSCCEP00000028305 | Zinc finger protein GLI1. | Serine/threonine kinase 36. | 0.806 |
GLI1 | SUFU | ENSCCEP00000025448 | ENSCCEP00000001552 | Zinc finger protein GLI1. | Suppressor of fused homolog isoform X1. | 0.999 |
GLI2 | GLI1 | ENSCCEP00000004669 | ENSCCEP00000025448 | Zinc finger protein GLI2. | Zinc finger protein GLI1. | 0.982 |
GLI2 | GLI3 | ENSCCEP00000004669 | ENSCCEP00000018213 | Zinc finger protein GLI2. | Transcriptional activator GLI3. | 0.963 |
GLI2 | KIF3A | ENSCCEP00000004669 | ENSCCEP00000014047 | Zinc finger protein GLI2. | Kinesin family member 3A. | 0.609 |
GLI2 | KIF7 | ENSCCEP00000004669 | ENSCCEP00000011892 | Zinc finger protein GLI2. | Kinesin-like protein KIF7. | 0.972 |
GLI2 | SMO | ENSCCEP00000004669 | ENSCCEP00000006205 | Zinc finger protein GLI2. | Smoothened homolog. | 0.829 |
GLI2 | STK36 | ENSCCEP00000004669 | ENSCCEP00000028305 | Zinc finger protein GLI2. | Serine/threonine kinase 36. | 0.746 |
GLI2 | SUFU | ENSCCEP00000004669 | ENSCCEP00000001552 | Zinc finger protein GLI2. | Suppressor of fused homolog isoform X1. | 0.994 |
GLI3 | GLI1 | ENSCCEP00000018213 | ENSCCEP00000025448 | Transcriptional activator GLI3. | Zinc finger protein GLI1. | 0.983 |
GLI3 | GLI2 | ENSCCEP00000018213 | ENSCCEP00000004669 | Transcriptional activator GLI3. | Zinc finger protein GLI2. | 0.963 |
GLI3 | KIF3A | ENSCCEP00000018213 | ENSCCEP00000014047 | Transcriptional activator GLI3. | Kinesin family member 3A. | 0.607 |
GLI3 | KIF7 | ENSCCEP00000018213 | ENSCCEP00000011892 | Transcriptional activator GLI3. | Kinesin-like protein KIF7. | 0.970 |
GLI3 | SMO | ENSCCEP00000018213 | ENSCCEP00000006205 | Transcriptional activator GLI3. | Smoothened homolog. | 0.801 |
GLI3 | STK36 | ENSCCEP00000018213 | ENSCCEP00000028305 | Transcriptional activator GLI3. | Serine/threonine kinase 36. | 0.748 |
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