STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD2RNA pseudouridine synthase domain containing 2. (391 aa)    
Predicted Functional Partners:
PUS7
Pseudouridylate synthase 7 homolog isoform X1.
    
 
 0.841
PUS7L
Pseudouridylate synthase 7 homolog-like protein isoform X1.
    
 
 0.838
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.787
GTPBP3
TRNA modification GTPase GTPBP3, mitochondrial.
  
 
 0.781
MRM3
16S rRNA (guanosine(1370)-2'-O)-methyltransferase.
  
 
 0.749
MRPL21
39S ribosomal protein L21, mitochondrial.
  
   0.710
TRUB1
Probable tRNA pseudouridine synthase 1.
  
 
 0.688
RPL23
Large subunit ribosomal protein L23e.
   
 
 0.683
MTG1
Mitochondrial ribosome-associated GTPase 1.
   
 
 0.672
RPL26
Large subunit ribosomal protein L26e.
   
   0.672
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.