STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF170E3 ubiquitin-protein ligase RNF170 isoform X1. (256 aa)    
Predicted Functional Partners:
ERLIN2
Erlin-2.
    
 
 0.644
UBE2J1
Ubiquitin-conjugating enzyme E2 J1.
    
 
 0.580
C6orf120
UPF0669 protein C6orf120 homolog.
      
 0.528
TMEM259
Membralin.
      
 0.451
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
      
 0.437
LOC111945850
E3 ubiquitin-protein ligase NRDP1-like.
      
 0.432
SLC25A27
Solute carrier family 25 (mitochondrial uncoupling protein), member 27.
      
 0.431
TOR2A
Prosalusin.
      
 0.422
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.