STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARA5Scavenger receptor class A member 5. (251 aa)    
Predicted Functional Partners:
ENSCCEP00000000205
annotation not available
   
 0.570
SPTLC1
Serine palmitoyltransferase 1.
      
 0.569
CD5
T-cell surface glycoprotein CD5.
   
 
 0.521
MARCO
Macrophage receptor with collagenous structure.
 
 
 0.473
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
     
 0.466
C1S
Complement C1s subcomponent isoform X1.
    
 0.457
IL34
Interleukin 34.
      
 0.420
HSP90B1
Heat shock protein 90kDa beta.
   
 0.416
PTK7
Inactive tyrosine-protein kinase 7.
    
 0.414
CD47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
 0.409
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.