STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC26A6Solute carrier family 26 member 6. (722 aa)    
Predicted Functional Partners:
LOC111944419
Double-strand break repair protein MRE11-like.
  
  0.467
MRE11
Double-strand break repair protein MRE11 isoform X1.
  
  0.467
LOC111944829
Heme-binding protein 1-like.
    
 0.449
GTSE1
G2 and S phase-expressed protein 1 isoform X1.
    
 0.449
ENSCCEP00000025884
annotation not available
    
 0.449
RAB33A
Ras-related protein Rab-33A.
   
  0.403
RAB1A
Ras-related protein Rab-1A.
   
  0.403
RAB19
Ras-related protein Rab-19.
   
  0.403
CGNL1
Cingulin-like protein 1 isoform X1.
   
  0.403
RABL6
Rab-like protein 6.
   
  0.403
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.