STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLA1Obg-like ATPase 1. (396 aa)    
Predicted Functional Partners:
PTRH1
peptidyl-tRNA hydrolase 1 homolog.
  
  
 0.931
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
  
 0.869
RRM1
Ribonucleoside-diphosphate reductase large subunit.
     
 0.831
FARS2
Phenylalanine--tRNA ligase, mitochondrial isoform X1.
  
  
 0.794
RPS3
Small subunit ribosomal protein S3e.
   
 
 0.770
MRPS9
28S ribosomal protein S9, mitochondrial.
  
  
 0.764
RPL11
Large subunit ribosomal protein L11e.
   
  
 0.751
GTPBP6
Putative GTP-binding protein 6.
  
  
 0.743
RARS2
Probable arginine--tRNA ligase, mitochondrial isoform X1.
  
  
 0.739
RARS1
Arginine--tRNA ligase, cytoplasmic.
  
  
 0.739
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.