Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BEND2 | CMC2 | ENSCCEP00000006492 | ENSCCEP00000007822 | BEN domain-containing protein 2 isoform X1. | COX assembly mitochondrial protein 2 homolog. | 0.518 |
BEND2 | NEK4 | ENSCCEP00000006492 | ENSCCEP00000027985 | BEN domain-containing protein 2 isoform X1. | NIMA (never in mitosis gene a)-related kinase 1/4/5. | 0.530 |
CMC2 | BEND2 | ENSCCEP00000007822 | ENSCCEP00000006492 | COX assembly mitochondrial protein 2 homolog. | BEN domain-containing protein 2 isoform X1. | 0.518 |
CMC2 | NEK4 | ENSCCEP00000007822 | ENSCCEP00000027985 | COX assembly mitochondrial protein 2 homolog. | NIMA (never in mitosis gene a)-related kinase 1/4/5. | 0.529 |
CNOT8 | NEK4 | ENSCCEP00000007594 | ENSCCEP00000027985 | CCR4-NOT transcription complex subunit 7/8. | NIMA (never in mitosis gene a)-related kinase 1/4/5. | 0.457 |
CNOT8 | UIMC1 | ENSCCEP00000007594 | ENSCCEP00000006906 | CCR4-NOT transcription complex subunit 7/8. | BRCA1-A complex subunit RAP80 isoform X1. | 0.528 |
ENSCCEP00000016297 | NEK4 | ENSCCEP00000016297 | ENSCCEP00000027985 | annotation not available | NIMA (never in mitosis gene a)-related kinase 1/4/5. | 0.438 |
GLT8D1 | NEK4 | ENSCCEP00000027983 | ENSCCEP00000027985 | Glycosyltransferase 8 domain-containing protein 1. | NIMA (never in mitosis gene a)-related kinase 1/4/5. | 0.512 |
NEK4 | BEND2 | ENSCCEP00000027985 | ENSCCEP00000006492 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | BEN domain-containing protein 2 isoform X1. | 0.530 |
NEK4 | CMC2 | ENSCCEP00000027985 | ENSCCEP00000007822 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | COX assembly mitochondrial protein 2 homolog. | 0.529 |
NEK4 | CNOT8 | ENSCCEP00000027985 | ENSCCEP00000007594 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | CCR4-NOT transcription complex subunit 7/8. | 0.457 |
NEK4 | ENSCCEP00000016297 | ENSCCEP00000027985 | ENSCCEP00000016297 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | annotation not available | 0.438 |
NEK4 | GLT8D1 | ENSCCEP00000027985 | ENSCCEP00000027983 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | Glycosyltransferase 8 domain-containing protein 1. | 0.512 |
NEK4 | NEK6 | ENSCCEP00000027985 | ENSCCEP00000010671 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | NIMA (never in mitosis gene a)-related kinase 6. | 0.431 |
NEK4 | NEK7 | ENSCCEP00000027985 | ENSCCEP00000025705 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | NIMA (never in mitosis gene a)-related kinase 7. | 0.431 |
NEK4 | RPGRIP1L | ENSCCEP00000027985 | ENSCCEP00000022107 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | Protein fantom isoform X1. | 0.438 |
NEK4 | SPATA7 | ENSCCEP00000027985 | ENSCCEP00000020121 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | Spermatogenesis-associated protein 7 isoform X1. | 0.428 |
NEK4 | UIMC1 | ENSCCEP00000027985 | ENSCCEP00000006906 | NIMA (never in mitosis gene a)-related kinase 1/4/5. | BRCA1-A complex subunit RAP80 isoform X1. | 0.441 |
NEK6 | NEK4 | ENSCCEP00000010671 | ENSCCEP00000027985 | NIMA (never in mitosis gene a)-related kinase 6. | NIMA (never in mitosis gene a)-related kinase 1/4/5. | 0.431 |
NEK7 | NEK4 | ENSCCEP00000025705 | ENSCCEP00000027985 | NIMA (never in mitosis gene a)-related kinase 7. | NIMA (never in mitosis gene a)-related kinase 1/4/5. | 0.431 |
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