STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS18540.1Response regulator. (387 aa)    
Predicted Functional Partners:
EAS19261.1
Hypothetical protein.
  
 0.926
EAS20788.1
Putative signal transduction histidine kinase.
 0.851
EAS20343.1
RNA polymerase, sigma-54 factor.
 
  
 0.832
EAS20940.1
Sensory transduction histidine kinase.
 
 0.823
EAS18695.1
Putative signal transduction protein.
0.798
EAS20225.1
Histidine kinase.
 
 0.793
EAS20924.1
Histidine kinase sensor protein.
   
 0.783
EAS18542.1
Mechanosensitive ion channel family protein.
       0.776
EAS18539.1
Polyphosphate kinase.
       0.773
EAS18541.1
Hypothetical protein.
       0.773
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.