STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS18780.1Conserved hypothetical protein. (262 aa)    
Predicted Functional Partners:
EAS19120.1
LysM domain protein.
 
  
  0.886
ribH
6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
    0.805
EAS20631.1
Conserved hypothetical protein.
  
    0.791
EAS18784.1
Conserved hypothetical protein.
  
     0.757
EAS20221.1
Conserved hypothetical protein.
 
  
 0.733
EAS20217.1
Outer membrane protein.
 
  
 0.725
EAS20269.1
Putative surface membrane protein, Bac_surface_Ag family.
  
    0.723
EAS20769.1
OmpA family protein.
 
  
 0.723
EAS18641.1
Hypothetical protein.
  
     0.722
EAS20165.1
Conserved hypothetical protein.
  
     0.712
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.