STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS19279.1Transcriptional regulator GntR. (238 aa)    
Predicted Functional Partners:
EAS18582.1
Putative alginate lyase.
 
     0.776
EAS18578.1
Alginate (poly beta-D-mannuronate) lyase.
 
     0.764
EAS20598.1
Flavodoxin reductase.
    
  0.742
EAS20066.1
Phenylacetic acid degradation oxidoreductase / ferredoxin-NADPH reductase.
    
  0.742
EAS18580.1
Putative dehydrogenase.
  
 
  0.707
EAS19280.1
Gluconate aldolase.
 
   
 0.629
EAS18581.1
Pectin degradation protein.
 
    0.605
EAS19281.1
Gluconate kinase.
 
     0.595
uxaC
Glucouronate isomerase.
       0.534
EAS19345.1
Putative DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.427
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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