STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmdGDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (375 aa)    
Predicted Functional Partners:
fcl
GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 0.995
EAS19114.1
Mannose-1-phosphate guanylyltransferase.
 
 
 0.751
EAS20691.1
Hypothetical protein.
  
 
  0.746
EAS20700.1
Putative sugar transferase.
  
  
 0.727
rplD
50S ribosomal protein L4 (rplD); Forms part of the polypeptide exit tunnel.
 
      0.686
EAS19136.1
Phosphomannomutase/phosphoglucomutase.
  
 
 0.673
EAS19083.1
Putative nucleoside diphosphate sugar pyrophosphorylase.
    
 0.664
EAS20699.1
dTDP-glucose 4, 6-dehydratase (NAD-dependent epimerase).
  
0.664
EAS19089.1
UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.646
hisB
Imidazoleglycerol-phosphate dehydratase, HisB; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
    
 0.645
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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