STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS20856.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
EAS20857.1
Coproporphyrinogen III oxidase.
       0.788
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.787
EAS20854.1
Hypothetical protein.
       0.773
EAS21057.1
Putative 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase.
  
     0.565
EAS20771.1
Hypothetical protein.
  
     0.546
EAS20304.1
Conserved hypothetical protein.
  
     0.517
EAS20723.1
Hypothetical protein.
  
     0.503
EAS20417.1
Conserved hypothetical protein.
  
     0.482
EAS20711.1
Conserved hypothetical protein.
  
     0.463
EAS18982.1
Conserved hypothetical transmembrane protein.
  
     0.460
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.