STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS20883.1Penicillin-binding protein. (787 aa)    
Predicted Functional Partners:
EAS20708.1
Outer membrane protein.
   
 0.813
EAS20817.1
Membrane carboxypeptidase/penicillin-binding protein.
  
  
0.636
EAS21065.1
Cell division protein FtsI/penicillin-binding protein.
  
  
 0.571
EAS18592.1
Putative penicillin-binding protein.
     
 0.509
EAS20678.1
Conserved hypothetical protein.
     
 0.509
EAS20882.1
Hypothetical protein.
       0.458
EAS20884.1
Putative sugar metabolism enzyme.
       0.427
EAS20885.1
Putative peptidase, M28 family.
       0.427
EAS18767.1
Conserved hypothetical protein.
  
     0.413
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.