STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS20979.1Outer membrane protein. (531 aa)    
Predicted Functional Partners:
EAS20978.1
Hypothetical protein.
 
  
 0.940
EAS20980.1
TonB-dependent outer membrane protein.
   
 0.936
EAS20985.1
Glycosyl hydrolase, alpha-amylase family; Belongs to the glycosyl hydrolase 13 family.
 
     0.839
EAS20977.1
Alpha amylase; Belongs to the glycosyl hydrolase 13 family.
 
     0.768
EAS20981.1
Transcriptional regulator, LacI family.
 
     0.669
EAS20982.1
Permease.
 
     0.660
EAS20987.1
Alpha-amylase.
 
     0.621
EAS20986.1
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
 
     0.483
EAS20769.1
OmpA family protein.
   
 
 0.447
EAS20217.1
Outer membrane protein.
   
 
 0.447
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.