STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS19262.1ATPase with chaperone activity, competance-related, ComM. (512 aa)    
Predicted Functional Partners:
EAS20603.1
Smf protein, DNA processing chain A.
 
 0.853
EAS19261.1
Hypothetical protein.
  
    0.808
EAS21074.1
Competence protein.
 
  
 0.786
EAS20715.1
Putative amidophosphoribosyl-transferase.
 
  
 0.778
EAS20774.1
Conserved hypothetical protein; Belongs to the UPF0102 family.
 
    0.760
EAS19260.1
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
       0.589
ruvC
Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.501
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.