Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAS18847.1 | EAS19743.1 | BBFL7_00667 | BBFL7_00289 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Naringenin-chalcone synthase. | 0.510 |
EAS18847.1 | EAS20023.1 | BBFL7_00667 | BBFL7_02423 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Deoxyribodipyrimidine photo-lyase. | 0.764 |
EAS18847.1 | infB | BBFL7_00667 | BBFL7_01291 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Translation initiation factor 2 (GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.510 |
EAS18847.1 | ybeY | BBFL7_00667 | BBFL7_01560 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Conserved hypothetical protein, UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.510 |
EAS18937.1 | EAS19743.1 | BBFL7_00383 | BBFL7_00289 | ABC transporter. | Naringenin-chalcone synthase. | 0.478 |
EAS18937.1 | EAS20023.1 | BBFL7_00383 | BBFL7_02423 | ABC transporter. | Deoxyribodipyrimidine photo-lyase. | 0.434 |
EAS18937.1 | EAS20865.1 | BBFL7_00383 | BBFL7_01757 | ABC transporter. | Superoxide dismutase, iron/manganese-dependent; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.478 |
EAS18937.1 | infB | BBFL7_00383 | BBFL7_01291 | ABC transporter. | Translation initiation factor 2 (GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.478 |
EAS18937.1 | ybeY | BBFL7_00383 | BBFL7_01560 | ABC transporter. | Conserved hypothetical protein, UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.478 |
EAS19137.1 | EAS19743.1 | BBFL7_02035 | BBFL7_00289 | ABC transporter. | Naringenin-chalcone synthase. | 0.478 |
EAS19137.1 | EAS20023.1 | BBFL7_02035 | BBFL7_02423 | ABC transporter. | Deoxyribodipyrimidine photo-lyase. | 0.434 |
EAS19137.1 | EAS20865.1 | BBFL7_02035 | BBFL7_01757 | ABC transporter. | Superoxide dismutase, iron/manganese-dependent; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.478 |
EAS19137.1 | infB | BBFL7_02035 | BBFL7_01291 | ABC transporter. | Translation initiation factor 2 (GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.478 |
EAS19137.1 | ybeY | BBFL7_02035 | BBFL7_01560 | ABC transporter. | Conserved hypothetical protein, UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.478 |
EAS19743.1 | EAS18847.1 | BBFL7_00289 | BBFL7_00667 | Naringenin-chalcone synthase. | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.510 |
EAS19743.1 | EAS18937.1 | BBFL7_00289 | BBFL7_00383 | Naringenin-chalcone synthase. | ABC transporter. | 0.478 |
EAS19743.1 | EAS19137.1 | BBFL7_00289 | BBFL7_02035 | Naringenin-chalcone synthase. | ABC transporter. | 0.478 |
EAS19743.1 | EAS20023.1 | BBFL7_00289 | BBFL7_02423 | Naringenin-chalcone synthase. | Deoxyribodipyrimidine photo-lyase. | 0.557 |
EAS19743.1 | EAS20118.1 | BBFL7_00289 | BBFL7_02518 | Naringenin-chalcone synthase. | ABC transporter, transmembrane region. | 0.478 |
EAS19743.1 | infB | BBFL7_00289 | BBFL7_01291 | Naringenin-chalcone synthase. | Translation initiation factor 2 (GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.634 |
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