STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS20049.1Putative carnitine operon, caiE-like protein. (202 aa)    
Predicted Functional Partners:
EAS18913.1
Carbonic anhydrase.
    
 0.940
EAS20052.1
Phenylacetic acid degradation protein paaN.
 
   
 0.737
EAS20876.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.666
EAS20050.1
Putative cysteine protease.
       0.625
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.607
eno
Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
  0.592
EAS19084.1
UDP-N-acetylglucosamine-2-epimerase NeuC.
    
  0.590
EAS20051.1
Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.589
EAS20056.1
Hypothetical protein.
 
  
 0.455
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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