STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI55706.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
SEI55734.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.470
SEI55684.1
Circadian clock protein KaiC.
       0.465
SEI55659.1
Response regulator receiver domain-containing protein.
       0.422
Your Current Organism:
Pseudomonas sp. NFR16
NCBI taxonomy Id: 1566248
Other names: P. sp. NFR16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.