STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI69178.1Ammonium transporter. (402 aa)    
Predicted Functional Partners:
SEJ67216.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.999
SEJ57161.1
Glutamate synthase (NADPH) large subunit.
 
  
 0.831
SEJ03363.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.784
SEJ86514.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.766
SEJ56690.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.764
SEJ04821.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
  
 0.754
SEI49793.1
Signal transduction histidine kinase.
  
 0.670
SEI69382.1
Two-component system, NarL family, sensor histidine kinase EvgS.
  
 0.561
SEJ39036.1
Na+/proline symporter.
  
 0.542
SEJ69499.1
Aspartate ammonia-lyase.
   
  
 0.532
Your Current Organism:
Pseudomonas sp. NFR16
NCBI taxonomy Id: 1566248
Other names: P. sp. NFR16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.