STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (561 aa)    
Predicted Functional Partners:
SFA79838.1
Histidine ammonia-lyase.
 
 0.991
hutI
Imidazolonepropionase.
 
 
 0.973
hutH
Histidine ammonia-lyase.
 
 0.973
SFA96171.1
Histidine ammonia-lyase.
 
 0.967
SFA79992.1
Histidine ammonia-lyase.
 
 0.963
SFA77732.1
Imidazolonepropionase.
  
 
 0.799
SFB27677.1
Imidazolonepropionase.
  
 
 0.799
SFA79823.1
Glycine betaine/proline transport system ATP-binding protein.
  
    0.786
SFA79808.1
Glycine betaine/proline transport system permease protein.
  
    0.785
SFB27424.1
Formiminoglutamate deiminase.
 
 
 0.750
Your Current Organism:
Rhizobium sp. NFR07
NCBI taxonomy Id: 1566262
Other names: R. sp. NFR07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.