STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB31506.1Siderophore synthetase component. (575 aa)    
Predicted Functional Partners:
SFB31518.1
fatty-acyl-CoA synthase.
  
  0.986
SFB31495.1
Siderophore synthetase component.
  
0.965
SFB31538.1
3-dehydroshikimate dehydratase.
 
    0.946
SFB31528.1
Hypothetical protein.
  
 
  0.928
SFA80297.1
Diaminopimelate decarboxylase.
  
 
 0.626
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.626
SFB55214.1
Protein N-acetyltransferase, RimJ/RimL family.
 
 
 0.583
SFB48712.1
Putative acetyltransferase.
 
 
 0.570
SFB42328.1
Protein N-acetyltransferase, RimJ/RimL family.
 
 
 0.559
SFB05831.1
Ribosomal-protein-alanine N-acetyltransferase.
  
 
 0.493
Your Current Organism:
Rhizobium sp. NFR07
NCBI taxonomy Id: 1566262
Other names: R. sp. NFR07
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.