STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP91661.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
SFP44246.1
Vitamin B12 transporter.
   
 0.858
SFP38292.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.836
SFP36740.1
Biopolymer transport protein ExbD.
  
 0.818
SFP42602.1
Biopolymer transport protein ExbD.
  
 0.818
SFP46236.1
Cell division and transport-associated protein TolR (TC 2.C.1.2.1).
  
 0.818
SFP56319.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
  
 0.818
SFP84089.1
Biopolymer transport protein TolR.
  
 0.818
SFQ39727.1
Iron complex outermembrane recepter protein.
  
 0.798
SFQ40458.1
Outer membrane receptor proteins, mostly Fe transport.
  
 0.798
SFP15999.1
Iron complex outermembrane recepter protein.
  
 0.798
Your Current Organism:
Variovorax sp. 770b2
NCBI taxonomy Id: 1566271
Other names: V. sp. 770b2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.