STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC93564.1Integrase/recombinase XerD. (306 aa)    
Predicted Functional Partners:
SFB72266.1
Integrase/recombinase XerC.
 
 
0.814
SFD59997.1
Holliday junction DNA helicase subunit RuvB.
 
  
 0.707
SFD59629.1
Holliday junction DNA helicase subunit RuvA.
  
  
 0.705
SFD19367.1
Phage integrase family protein.
   
 0.643
SFC23776.1
Excinuclease ABC subunit A.
 
  
  0.641
SFD19872.1
Excinuclease ABC subunit B.
     
 0.638
SFC93544.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.636
SFD58345.1
Excinuclease ABC subunit A.
 
  
  0.636
SFB71758.1
Holliday junction endonuclease RuvC.
     
 0.634
SFC97259.1
Excinuclease ABC subunit C.
    
  0.604
Your Current Organism:
Variovorax sp. NFACC26
NCBI taxonomy Id: 1566275
Other names: V. sp. NFACC26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.