STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK69730.1Stage IV sporulation protein FA. (256 aa)    
Predicted Functional Partners:
SFK69714.1
Stage IV sporulation protein FB.
 
  
 0.932
SFK69698.1
Ribonuclease G.
       0.829
SFK93928.1
Stage III sporulation protein AE.
  
    0.736
SFL34874.1
Conserved membrane protein YqhR.
  
     0.702
SFK93896.1
Stage III sporulation protein AG.
  
  
 0.689
SFM31670.1
Stage II sporulation protein E.
  
    0.677
SFK92320.1
Spore germination protein.
  
     0.665
rplU
Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.662
SFK69660.1
Hypothetical protein.
       0.660
SFL97672.1
Uncharacterized conserved protein YybS, DUF2232 family.
  
     0.659
Your Current Organism:
Paenibacillus sp. 112
NCBI taxonomy Id: 1566278
Other names: P. sp. 1_12, Paenibacillus sp. 1_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.