Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK93001.1 | SFK93020.1 | SAMN03159341_102216 | SAMN03159341_102217 | Flagellar operon protein TIGR03826. | Major Facilitator Superfamily protein. | 0.486 |
SFK93001.1 | SFK93034.1 | SAMN03159341_102216 | SAMN03159341_102218 | Flagellar operon protein TIGR03826. | Major Facilitator Superfamily protein. | 0.592 |
SFK93020.1 | SFK93001.1 | SAMN03159341_102217 | SAMN03159341_102216 | Major Facilitator Superfamily protein. | Flagellar operon protein TIGR03826. | 0.486 |
SFK93020.1 | SFK93034.1 | SAMN03159341_102217 | SAMN03159341_102218 | Major Facilitator Superfamily protein. | Major Facilitator Superfamily protein. | 0.996 |
SFK93020.1 | SFL48570.1 | SAMN03159341_102217 | SAMN03159341_106302 | Major Facilitator Superfamily protein. | PTS system, D-glucosamine-specific IIC component. | 0.410 |
SFK93020.1 | SFL98143.1 | SAMN03159341_102217 | SAMN03159341_11360 | Major Facilitator Superfamily protein. | Predicted ATPase. | 0.494 |
SFK93034.1 | SFK93001.1 | SAMN03159341_102218 | SAMN03159341_102216 | Major Facilitator Superfamily protein. | Flagellar operon protein TIGR03826. | 0.592 |
SFK93034.1 | SFK93020.1 | SAMN03159341_102218 | SAMN03159341_102217 | Major Facilitator Superfamily protein. | Major Facilitator Superfamily protein. | 0.996 |
SFK93034.1 | SFL48570.1 | SAMN03159341_102218 | SAMN03159341_106302 | Major Facilitator Superfamily protein. | PTS system, D-glucosamine-specific IIC component. | 0.638 |
SFL48570.1 | SFK93020.1 | SAMN03159341_106302 | SAMN03159341_102217 | PTS system, D-glucosamine-specific IIC component. | Major Facilitator Superfamily protein. | 0.410 |
SFL48570.1 | SFK93034.1 | SAMN03159341_106302 | SAMN03159341_102218 | PTS system, D-glucosamine-specific IIC component. | Major Facilitator Superfamily protein. | 0.638 |
SFL48570.1 | SFL98143.1 | SAMN03159341_106302 | SAMN03159341_11360 | PTS system, D-glucosamine-specific IIC component. | Predicted ATPase. | 0.652 |
SFL98143.1 | SFK93020.1 | SAMN03159341_11360 | SAMN03159341_102217 | Predicted ATPase. | Major Facilitator Superfamily protein. | 0.494 |
SFL98143.1 | SFL48570.1 | SAMN03159341_11360 | SAMN03159341_106302 | Predicted ATPase. | PTS system, D-glucosamine-specific IIC component. | 0.652 |