STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL58455.1Hypothetical protein. (848 aa)    
Predicted Functional Partners:
SFL58433.1
Oligogalacturonate lyase.
 
 
  0.698
SFL58479.1
Hypothetical protein.
    
  0.654
SFL45035.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.607
SFM12281.1
FtsK/SpoIIIE family protein.
    
   0.607
SFM15730.1
Oligogalacturonide lyase.
  
 
  0.597
SFM22142.1
Polygalacturonase.
  
  0.597
SFL76208.1
Hypothetical protein.
    
   0.576
SFL85239.1
Hypothetical protein.
    
   0.576
SFL85262.1
Protein of unknown function, DUF255.
    
   0.576
SFK99348.1
Oligogalacturonide lyase.
  
 
  0.575
Your Current Organism:
Paenibacillus sp. 112
NCBI taxonomy Id: 1566278
Other names: P. sp. 1_12, Paenibacillus sp. 1_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.