STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL76317.1DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. (486 aa)    
Predicted Functional Partners:
SFL76298.1
Cyclohexyl-isocyanide hydratase.
       0.521
SFM26841.1
Aminodeoxychorismate synthase, component I.
  
 0.494
SFK69535.1
Homoserine dehydrogenase.
   
  0.463
SFK91498.1
Prephenate dehydrogenase.
    
 0.459
SFK68192.1
Allantoinase.
  
 
  0.443
SFL00126.1
Indolepyruvate decarboxylase.
   
 0.442
pheA
Prephenate dehydratase.
    
 0.435
SFM13237.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.432
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
  0.427
SFL28030.1
D-alanine transaminase.
  
  0.427
Your Current Organism:
Paenibacillus sp. 112
NCBI taxonomy Id: 1566278
Other names: P. sp. 1_12, Paenibacillus sp. 1_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.