STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM01325.1Two-component system, sensor histidine kinase YesM. (574 aa)    
Predicted Functional Partners:
SFK67304.1
Two-component system, response regulator YesN.
 
 
  0.943
SFL11775.1
Two-component system, response regulator YesN.
  
 
  0.915
SFL77268.1
Two-component system, response regulator YesN.
  
 
  0.913
SFL25767.1
Two-component system, response regulator YesN.
  
 
  0.897
SFL14783.1
Two-component system, response regulator YesN.
  
 
  0.887
SFM01342.1
Two-component system, response regulator YesN.
 
    0.886
SFL25979.1
Two-component system, response regulator YesN.
  
 
  0.884
SFM38948.1
Helix-turn-helix domain-containing protein.
  
 
  0.878
SFM45978.1
Helix-turn-helix domain-containing protein.
  
 
  0.875
SFL25329.1
Two-component system, response regulator YesN.
  
 
  0.872
Your Current Organism:
Paenibacillus sp. 112
NCBI taxonomy Id: 1566278
Other names: P. sp. 1_12, Paenibacillus sp. 1_12
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.