STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET33926.1Predicted dehydrogenase. (360 aa)    
Predicted Functional Partners:
SET33897.1
Sugar phosphate isomerase/epimerase.
 
 
  0.946
SET33984.1
Sugar phosphate isomerase/epimerase.
 
 
  0.913
SEU12516.1
Predicted dehydrogenase.
  
  
  0.911
SET22385.1
Sugar phosphate isomerase/epimerase.
 
 
  0.829
SET33958.1
Predicted dehydrogenase.
 
    
0.801
SET59370.1
Virulence factor.
  
     0.751
SEU02849.1
Predicted dehydrogenase.
 
  
 
0.729
SEU18143.1
Sugar phosphate isomerase/epimerase.
  
 
  0.683
SET22269.1
Sugar phosphate isomerase/epimerase.
 
 
  0.592
SET22518.1
Hypothetical protein.
  
 
  0.579
Your Current Organism:
Paenibacillus sp. NFR01
NCBI taxonomy Id: 1566279
Other names: P. sp. NFR01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.