STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA36580.1Translocation and assembly module TamB. (1387 aa)    
Predicted Functional Partners:
SDA36582.1
Translocation and assembly module TamA.
 
 
 0.991
SDA12960.1
Translocation and assembly module TamA.
 
 
 0.960
SDA33832.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.769
SDA12634.1
Hypothetical protein.
  
     0.767
SDA11947.1
EF hand.
  
     0.764
SDA19520.1
Hypothetical protein.
  
     0.757
SDA15849.1
Hypothetical protein.
  
     0.753
lptD
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
   
 0.738
SDA12060.1
Tetratricopeptide repeat-containing protein.
  
     0.734
SDA12982.1
Hypothetical protein.
  
     0.733
Your Current Organism:
Sphingomonas sp. NFR15
NCBI taxonomy Id: 1566282
Other names: S. sp. NFR15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.