STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ99278.1Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn). (101 aa)    
Predicted Functional Partners:
SFJ99305.1
Hypothetical protein.
       0.863
SFK03308.1
Hypothetical protein.
  
     0.473
SFJ99326.1
Beta-hydroxylase.
       0.461
SFJ19339.1
Lysophospholipase.
  
     0.426
SFJ80244.1
Outer membrane immunogenic protein.
  
     0.420
SFK34265.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
     0.419
SFJ99354.1
Zinc protease; Belongs to the peptidase M16 family.
 
     0.414
Your Current Organism:
Sphingomonas sp. NFR04
NCBI taxonomy Id: 1566283
Other names: S. sp. NFR04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.