STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL33595.1Transcriptional regulator, AraC family. (274 aa)    
Predicted Functional Partners:
SFL33618.1
CRISPR-associated protein Cas5, N-terminal domain-containing protein.
 
    0.639
SFL81706.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.620
SFL33613.1
Methyltransferase domain-containing protein.
 
     0.616
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.609
SFL28779.1
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
    
  0.501
SFL61216.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
     
 0.500
SFL30801.1
Anthranilate synthase, component I.
     
 0.480
SFM27885.1
Transcriptional regulator, TetR family.
  
     0.421
SFL87995.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
     
 0.403
Your Current Organism:
Bradyrhizobium sp. NFR13
NCBI taxonomy Id: 1566285
Other names: B. sp. NFR13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.