STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJS60998.1Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)    
Predicted Functional Partners:
AJS60195.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
AJS57835.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.908
AJS59407.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.868
AJS59605.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.684
AJS61719.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.672
AJS60141.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.610
AJS60708.1
HD family phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.607
AJS59613.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.602
AJS59617.1
HD family phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.597
AJS60143.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.594
Your Current Organism:
Paenibacillus sp. IHBB10380
NCBI taxonomy Id: 1566358
Other names: P. sp. IHBB 10380, Paenibacillus sp. IHBB 10380
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.