STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPGR_00621Methyltransferase. (356 aa)    
Predicted Functional Partners:
CPGR_00622
Hypothetical protein.
 
     0.779
CPGR_03481
Type 11 methyltransferase.
  
 
  0.756
CPGR_00403
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase.
 
 
 0.753
CPGR_00467
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase.
 
 
 0.748
CPGR_00960
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase.
 
 
 0.743
CPGR_00642
Chelatase.
  
 0.712
CPGR_01078
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase.
   
 0.709
CPGR_01262
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase.
   
 0.709
CPGR_01508
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase.
   
 0.709
CPGR_01710
Oxidoreductase.
   
 0.709
Your Current Organism:
Mycolicibacterium komanii
NCBI taxonomy Id: 1566885
Other names: ATCC BAA-2758, CIP 110823, M. komanii, Mycobacterium komaniense, Mycobacterium komaniense Gcebe et al. 2018
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