STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPGR_01566Heparin-binding hemagglutinin. (210 aa)    
Predicted Functional Partners:
CPGR_01412
Putative secreted protein.
  
     0.771
CPGR_04463
Transmembrane protein.
  
     0.770
CPGR_04687
Integral membrane protein.
  
     0.770
CPGR_01713
Putative transmembrane protein.
  
     0.769
CPGR_03302
Hypothetical protein.
  
     0.767
CPGR_04684
Hypothetical protein.
  
     0.767
CPGR_01337
RNA polymerase sigma-70 factor.
  
     0.765
CPGR_01615
Transmembrane protein.
  
     0.756
CPGR_04029
Alpha/beta hydrolase family protein.
  
     0.756
CPGR_01425
Hypothetical protein.
  
     0.754
Your Current Organism:
Mycolicibacterium komanii
NCBI taxonomy Id: 1566885
Other names: ATCC BAA-2758, CIP 110823, M. komanii, Mycobacterium komaniense, Mycobacterium komaniense Gcebe et al. 2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.