STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPGR_01924Threonine synthase. (360 aa)    
Predicted Functional Partners:
CPGR_01923
Homoserine kinase.
 
 
 0.999
CPGR_01925
Homoserine dehydrogenase.
 
 0.994
CPGR_03184
Threonine dehydratase.
 
 
0.947
CPGR_02642
Threonine aldolase.
  
 0.936
CPGR_00564
Phosphoserine aminotransferase.
   
 0.929
CPGR_01926
Diaminopimelate decarboxylase.
 
   
 0.913
CPGR_01927
arginyl-tRNA synthetase.
  
  
 0.886
CPGR_03462
Aspartate kinase.
  
 
 0.855
leuD
Isopropylmalate isomerase small subunit.
 
  
 0.842
CPGR_02385
Threonine dehydratase.
  
 
 0.820
Your Current Organism:
Mycolicibacterium komanii
NCBI taxonomy Id: 1566885
Other names: ATCC BAA-2758, CIP 110823, M. komanii, Mycobacterium komaniense, Mycobacterium komaniense Gcebe et al. 2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.