STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000971965_00945Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000971965_04344
Unannotated protein.
  
     0.772
GCA_000971965_00335
Unannotated protein.
  
     0.769
GCA_000971965_04178
Unannotated protein.
  
     0.765
GCA_000971965_01915
Unannotated protein.
 
     0.757
GCA_000971965_00607
Unannotated protein.
  
     0.753
GCA_000971965_00720
Unannotated protein.
  
     0.749
GCA_000971965_02830
Unannotated protein.
  
   
 0.748
GCA_000971965_02298
Unannotated protein.
  
 
   0.736
GCA_000971965_03168
Unannotated protein.
   
   0.734
GCA_000971965_00923
Unannotated protein.
  
     0.722
Your Current Organism:
Paenibacillus wulumuqiensis
NCBI taxonomy Id: 1567107
Other names: CPCC 100602, JCM 30284, P. wulumuqiensis, Paenibacillus sp. Y24, Paenibacillus wulumuqiensis Zhu et al. 2015, strain Y24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.