STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000971965_03549Unannotated protein. (345 aa)    
Predicted Functional Partners:
GCA_000971965_01300
Unannotated protein.
 
 0.961
GCA_000971965_03941
Unannotated protein.
 
 0.943
GCA_000971965_01298
Unannotated protein.
 
 0.942
GCA_000971965_03680
Unannotated protein.
 
 0.934
GCA_000971965_03949
Unannotated protein.
 
 0.929
GCA_000971965_01299
Unannotated protein.
 
 0.927
GCA_000971965_03679
Unannotated protein.
 
 0.926
GCA_000971965_03942
Unannotated protein.
 
 0.874
GCA_000971965_02047
Unannotated protein.
 
 0.873
GCA_000971965_03948
Unannotated protein.
 
 0.870
Your Current Organism:
Paenibacillus wulumuqiensis
NCBI taxonomy Id: 1567107
Other names: CPCC 100602, JCM 30284, P. wulumuqiensis, Paenibacillus sp. Y24, Paenibacillus wulumuqiensis Zhu et al. 2015, strain Y24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.