STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000971965_03812Unannotated protein. (225 aa)    
Predicted Functional Partners:
GCA_000971965_01813
Unannotated protein.
  
     0.687
GCA_000971965_03624
Unannotated protein.
  
     0.670
GCA_000971965_01049
Unannotated protein.
  
     0.652
GCA_000971965_01812
Unannotated protein.
  
     0.645
GCA_000971965_01048
Unannotated protein.
  
     0.602
GCA_000971965_03813
Unannotated protein.
       0.580
GCA_000971965_00920
Unannotated protein.
  
     0.555
GCA_000971965_00923
Unannotated protein.
  
     0.551
GCA_000971965_00607
Unannotated protein.
  
     0.537
GCA_000971965_03038
Unannotated protein.
  
     0.531
Your Current Organism:
Paenibacillus wulumuqiensis
NCBI taxonomy Id: 1567107
Other names: CPCC 100602, JCM 30284, P. wulumuqiensis, Paenibacillus sp. Y24, Paenibacillus wulumuqiensis Zhu et al. 2015, strain Y24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.