STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001647285_02766Unannotated protein. (486 aa)    
Predicted Functional Partners:
GCA_001647285_02765
Unannotated protein.
 
     0.837
GCA_001647285_03541
Unannotated protein.
    
  0.779
GCA_001647285_01136
Unannotated protein.
    
  0.772
GCA_001647285_03400
Unannotated protein.
    
  0.771
GCA_001647285_00738
Unannotated protein.
  
     0.756
GCA_001647285_00174
Unannotated protein.
  
    0.746
GCA_001647285_00516
Unannotated protein.
  
     0.736
GCA_001647285_01955
Unannotated protein.
  
     0.728
GCA_001647285_00230
Unannotated protein.
  
    0.716
GCA_001647285_00893
Unannotated protein.
  
     0.709
Your Current Organism:
Rufibacter roseus
NCBI taxonomy Id: 1567108
Other names: CPCC 100615, KCTC 42217, R. roseus, Rufibacter roseus Zhang et al. 2015, Rufibacter sp. H359, strain H359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.