STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0076PFAM: flagellin domain protein; KEGG: ade:Adeh_1342 flagellin-like. (275 aa)    
Predicted Functional Partners:
Mmc1_0086
PFAM: flagellar protein FliS; KEGG: bba:Bd0611 flagellar protein FliS.
 
 
 0.814
Mmc1_3225
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.755
Mmc1_0085
PFAM: flagellar protein FliS; KEGG: bba:Bd0611 flagellar protein FliS.
  
 
 0.691
Mmc1_0266
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.689
Mmc1_0083
PFAM: flagellar protein FlaG protein; KEGG: cvi:CV3877 Flagellin protein.
 
 
 0.683
Mmc1_0084
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.682
Mmc1_1945
PFAM: MotA/TolQ/ExbB proton channel; KEGG: ppr:PBPRA0808 putative sodium-driven polar flagellar protein MotA.
 
  
 0.679
Mmc1_0080
KEGG: sat:SYN_02811 flagellin and related hook-associated proteins.
 
  
 0.663
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: dar:Daro_0776 flagellar hook-basal body complex protein FliE.
 
 
 0.659
Mmc1_1946
PFAM: OmpA/MotB domain protein; KEGG: hch:HCH_05862 flagellar motor protein.
 
  
 0.624
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.