STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0216Asparagine synthase (glutamine-hydrolyzing); KEGG: sme:SMb20481 putative asparagine synthetase (glutamine amidotransferase) protein; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase. (598 aa)    
Predicted Functional Partners:
Mmc1_0217
PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMb20482 hypothetical protein.
 
 
 0.978
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: pca:Pcar_1615 aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.912
argG
PFAM: argininosuccinate synthase; KEGG: nmu:Nmul_A1043 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.911
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.909
Mmc1_0698
L-aspartate aminotransferase apoenzyme; PFAM: aminotransferase, class I and II; KEGG: ret:RHE_CH02998 aspartate aminotransferase protein.
     
 0.903
Mmc1_1770
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.900
Mmc1_0966
KEGG: gme:Gmet_1880 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family.
  
 
 0.859
Mmc1_0220
PFAM: peptidase M20; peptidase M42 family protein; KEGG: eba:ebA5273 conserved hypothetical protein, predicted peptidase M42 family.
 
  
 0.820
Mmc1_3085
KEGG: sme:SMb21584 hypothetical protein.
     
  0.800
Mmc1_0215
PFAM: regulatory protein, MarR; transcriptional regulator TrmB; transcriptional regulator PadR family protein; KEGG: pha:PSHAa2967 transcriptional regulator.
     
 0.558
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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