STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0361Hypothetical protein. (335 aa)    
Predicted Functional Partners:
Mmc1_0362
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mba:Mbar_A2526 hypothetical protein.
       0.780
Mmc1_3110
PFAM: protein of unknown function DUF159; KEGG: gvi:gll2498 hypothetical protein; Belongs to the SOS response-associated peptidase family.
   
  
 0.546
Mmc1_0175
PFAM: Prephenate dehydrogenase; KEGG: gsu:GSU2607 prephenate dehydrogenase.
  
    0.537
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
  
 0.521
Mmc1_1401
KEGG: dar:Daro_0617 phosphoribosyltransferase.
   
    0.517
thrS
Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
       0.488
hslV
HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
    0.426
Mmc1_0575
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mca:MCA0625 carbohydrate ABC transporter, ATP-binding protein, putative.
   
    0.412
Mmc1_2426
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mhu:Mhun_3088 ABC transporter related.
   
    0.412
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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