STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0486Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: pae:PA4913 putative branched-chain amino acid transport system substrate-binding protein; TC 3.A.1.4.-. (374 aa)    
Predicted Functional Partners:
Mmc1_0488
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: psb:Psyr_0599 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
Mmc1_0487
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: pfo:Pfl_0553 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
Mmc1_0489
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA4910 putative branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-.
 
 
 0.994
Mmc1_0490
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_0556 ABC transporter-like; TC 3.A.1.4.-.
 
 
 0.992
Mmc1_2647
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rpb:RPB_2081 twin-arginine translocation pathway signal; TC 3.A.1.4.-.
  
 
0.928
Mmc1_0192
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: cps:CPS_3260 hypothetical protein; TC 3.A.1.4.-.
   
 
 0.904
Mmc1_1023
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_04514 ABC-type branched-chain amino acid transport system, ATPase component; TC 3.A.1.4.-.
 
  
 0.686
Mmc1_1020
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; PBS lyase HEAT domain protein repeat-containing protein; KEGG: sme:SMb20604 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.678
Mmc1_1021
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: hch:HCH_04516 ABC-type branched-chain amino acid transport system, permease component; TC 3.A.1.4.-.
 
  
 0.645
Mmc1_0485
KEGG: psb:Psyr_3804 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like.
       0.501
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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