STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0501PFAM: Rhodanese domain protein; KEGG: noc:Noc_0191 thiosulfate sulfurtransferase. (285 aa)    
Predicted Functional Partners:
Mmc1_1905
Sulfate thiol esterase SoxB; PFAM: 5'-Nucleotidase domain protein; KEGG: bja:blr3515 probable Mn-dependent hydrolase; Belongs to the 5'-nucleotidase family.
    
 0.919
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
   
 0.916
Mmc1_3063
PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: noc:Noc_1649 aminotransferase, class V.
   
 0.916
Mmc1_1906
Diheme cytochrome SoxA (sulfur oxidation); KEGG: bja:blr3514 probable diheme cytochrome c.
  
 
 0.912
Mmc1_3714
Diheme cytochrome SoxA (sulfur oxidation); KEGG: bja:blr3514 probable diheme cytochrome c.
  
 
 0.912
Mmc1_1909
Monoheme cytochrome SoxX (sulfur oxidation); KEGG: bja:blr3511 probable cytochrome c.
    
 0.908
Mmc1_3717
Monoheme cytochrome SoxX (sulfur oxidation); KEGG: bja:blr3511 probable cytochrome c.
    
 0.908
Mmc1_1801
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mag:amb3541 anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.907
Mmc1_1907
Sulfur compound chelating protein SoxZ; KEGG: aae:aq_1809 hypothetical protein.
     
 0.906
Mmc1_1908
Thiosulfate-binding protein SoxY; KEGG: rpb:RPB_4371 twin-arginine translocation pathway signal.
     
 0.906
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.