STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0523PFAM: electron transfer flavoprotein beta-subunit; KEGG: atc:AGR_L_2463 electron transfer flavoprotein beta-subunit (beta-ETF) (electron transfer flavoprotein small subunit) (ETFSS). (251 aa)    
Predicted Functional Partners:
Mmc1_0522
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: rru:Rru_A3078 electron transfer flavoprotein.
 0.999
Mmc1_3687
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
Mmc1_2205
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tma:TM1217 glutamate synthase (NADPH) small chain.
  
 
 0.983
Mmc1_3558
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: neu:NE1548 acyl-CoA dehydrogenase.
 
 
 0.980
Mmc1_3556
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: noc:Noc_0826 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.950
Mmc1_1918
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: cvi:CV4235 probable (S)-2-hydroxy-acid oxidase.
  
 
 0.821
Mmc1_0524
PFAM: DSBA oxidoreductase; KEGG: eba:ebA3617 thiol:disulfide interchange protein DsbA precursor.
       0.773
napF
Periplasmic nitrate reductase maturation protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.
   
 
 0.716
Mmc1_0774
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: neu:NE2510 NADH:flavin oxidoreductase/NADH oxidase.
  
 
 0.713
Mmc1_0291
PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: cvi:CV3269 hypothetical protein.
  
 
 0.710
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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