STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0551KEGG: rfr:Rfer_4073 cytochrome c family protein. (688 aa)    
Predicted Functional Partners:
Mmc1_1590
Periplasmic nitrate reductase subunit NapG; TIGRFAM: MauM/NapG family ferredoxin-type protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dar:Daro_3839 MauM/NapG ferredoxin-type protein.
  
 
 0.953
Mmc1_2505
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rfr:Rfer_4089 twin-arginine translocation pathway signal.
 
 
 0.945
Mmc1_1432
Pyruvate kinase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate kinase; HpcH/HpaI aldolase; KEGG: ade:Adeh_4234 pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.936
Mmc1_1708
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mag:amb3377 Fe-S-cluster-containing hydrogenase components 1.
  
 
 0.922
Mmc1_1800
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mag:amb3542 Fe-S-cluster-containing hydrogenase components 1.
  
 
 0.922
Mmc1_1581
PFAM: aminotransferase, class V; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dsy:DSY4014 putative anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.913
Mmc1_1580
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY4014 putative anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.872
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.872
Mmc1_1630
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mag:amb3818 anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.872
Mmc1_1801
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mag:amb3541 anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.872
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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