STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Mmc1_0560Nucleotidyl transferase; PFAM: CBS domain containing protein; Nucleotidyl transferase; KEGG: sru:SRU_0607 putative mannose-1-phosphate guanyltransferase. (351 aa)    
Predicted Functional Partners:
Mmc1_0559
PFAM: acylneuraminate cytidylyltransferase; KEGG: sru:SRU_0608 CMP-N-acetlyneuraminic acid synthetase.
  
 0.963
Mmc1_1555
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A6030 hypothetical protein.
 
 
 0.948
Mmc1_0561
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ilo:IL0550 UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.912
Mmc1_0562
PFAM: N-acetylneuraminic acid synthase, N-terminal domain; SAF domain; KEGG: syw:SYNW0448 putative N-acetylneuraminic acid synthetase.
 
  
 0.884
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
 
 0.869
Mmc1_0563
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mag:amb0078 predicted pyridoxal phosphate-dependent enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.858
Mmc1_2310
KEGG: nme:NMB1820 pilin glycosylation protein PglB.
 
  
 0.779
Mmc1_1405
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: plu:plu4658 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.701
Mmc1_0913
KEGG: syf:Synpcc7942_1608 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
  
  
 0.679
Mmc1_2407
N-acetylneuraminate synthase; PFAM: GCN5-related N-acetyltransferase; N-acetylneuraminic acid synthase, N-terminal domain; SAF domain; KEGG: bsu:BG10613 spore coat polysaccharide biosynthesis protein spsE.
 
  
 0.676
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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